Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
treBPTS system trehalose-specific EIIBC component. (471 aa)    
Predicted Functional Partners:
crr_1
Glucose-specific phosphotransferase enzyme IIA component.
 0.996
crr_2
Glucose-specific phosphotransferase enzyme IIA component.
 0.996
treA
Trehalose-6-phosphate hydrolase.
 
 
 0.986
ptsH
Phosphocarrier protein HPr.
  
 
 0.942
malH
Maltose-6'-phosphate glucosidase MalH.
 
 
 0.934
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.880
fruA_2
PTS system fructose-specific EIIABC component.
   
 
 0.858
sacA
Sucrose-6-phosphate hydrolase.
 
 
 0.839
murP
PTS system N-acetylmuramic acid-specific EIIBC component.
 
 
 0.776
treR_1
Trehalose operon transcriptional repressor.
 
  
 0.740
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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