Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR94929.1Putative ABC transporter ATP-binding protein. (614 aa)    
Predicted Functional Partners:
AQR94928.1
Putative ABC transporter ATP-binding protein.
 
   
0.852
tcyN_1
L-cystine import ATP-binding protein TcyN.
 
     
0.585
grsB
Gramicidin S synthase 2.
  
  
 0.558
AQR96122.1
Hypothetical protein.
  
 
 0.558
lagD
lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
 
0.522
spoVK
Stage V sporulation protein K.
   
 0.511
tetR_3
Tetracycline repressor protein class B from transposon Tn10.
       0.504
cydD
ATP-binding/permease protein CydD.
 
 
 
0.474
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.464
udk_1
Uridine kinase.
 
 
 0.455
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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