Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQR94944.1FIST N domain protein. (380 aa)    
Predicted Functional Partners:
zraS_2
Sensor protein ZraS.
  
  
 0.814
zraS_1
Sensor protein ZraS.
     
 0.797
hupR1_2
Hydrogenase transcriptional regulatory protein hupR1.
       0.722
barA_2
Signal transduction histidine-protein kinase BarA.
 
  
 0.530
zraS_4
Sensor protein ZraS.
  
  
 0.503
cph2_3
Phytochrome-like protein cph2.
  
  
 0.491
AQR94947.1
Rubrerythrin.
       0.468
srrA_1
Transcriptional regulatory protein SrrA.
   
    0.439
walR_1
Transcriptional regulatory protein WalR.
   
    0.439
phoP_1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
   
    0.439
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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