Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
AQR94955.1Iron hydrogenase 1. (457 aa)    
Predicted Functional Partners:
hndC_3
NADP-reducing hydrogenase subunit HndC.
 
 
 0.987
hndC_2
NADP-reducing hydrogenase subunit HndC.
 
 
 0.986
hndC_1
NADP-reducing hydrogenase subunit HndC.
 
 
 0.982
hndA
NADP-reducing hydrogenase subunit HndA.
 0.922
fprA2
Flavo-diiron protein FprA2.
  
 
 0.892
fprA1_1
Flavo-diiron protein FprA1.
  
 
 0.892
sfrB_3
NADPH-Fe(3+) oxidoreductase subunit beta.
   
 0.866
AQR96122.1
Hypothetical protein.
  
 
 0.866
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
   
 0.852
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
   
 0.852
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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