Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ycf3Photosystem I assembly protein Ycf3. (1074 aa)    
Predicted Functional Partners:
hscC_2
Chaperone protein HscC; Belongs to the heat shock protein 70 family.
 
 0.918
AQR92956.1
Tetratricopeptide repeat protein.
  
 
 0.769
arnC_1
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
  
 0.765
AQR97052.1
Beta-monoglucosyldiacylglycerol synthase.
  
 0.765
htpG
Chaperone protein HtpG.
 
 0.756
AQR96390.1
Ankyrin repeat protein.
 
 0.726
hscC_1
Chaperone protein HscC; Belongs to the heat shock protein 70 family.
 
 0.689
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 0.678
AQR94951.1
Hypothetical protein.
 
 
0.660
AQR95874.1
Hypothetical protein.
 
 
 0.657
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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