STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95051.1Hypothetical protein. (545 aa)    
Predicted Functional Partners:
ecsA
ABC-type transporter ATP-binding protein EcsA.
 
    0.971
AQR95049.1
Hypothetical protein.
       0.498
AQR97927.1
glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities.
   
    0.455
AQR95052.1
Acetyltransferase (GNAT) family protein.
       0.451
AQR97523.1
Tetratricopeptide repeat protein.
   
    0.447
drrA_2
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
    0.425
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.