STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
moaA_5Cyclic pyranopterin monophosphate synthase. (289 aa)    
Predicted Functional Partners:
AQR95060.1
Hypothetical protein.
       0.571
AQR97924.1
Stress responsive A/B barrel domain protein.
  
     0.568
nasF
uroporphyrinogen-III C-methyltransferase.
  
 
 0.502
hemE
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.482
nifB_3
FeMo cofactor biosynthesis protein NifB.
 
 
 0.437
AQR97052.1
Beta-monoglucosyldiacylglycerol synthase.
 
   
 0.416
AQR92795.1
BFD-like [2Fe-2S] binding domain protein.
 
 
 0.412
AQR98167.1
Hypothetical protein.
  
     0.406
AQR97436.1
Stress responsive A/B barrel domain protein.
  
     0.403
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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