Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR95097.1Hypothetical protein. (428 aa)    
Predicted Functional Partners:
rfbX
Putative O-antigen transporter.
       0.791
tuaH
Putative teichuronic acid biosynthesis glycosyltransferase TuaH.
       0.773
ptk
Tyrosine-protein kinase ptk.
       0.770
AQR95099.1
N-glycosyltransferase.
       0.705
AQR95100.1
Acyltransferase family protein.
       0.654
AQR95101.1
Hypothetical protein.
       0.643
AQR95102.1
Hypothetical protein.
       0.599
AQR95094.1
GDSL-like lipase/acylhydrolase.
       0.501
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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