STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95099.1N-glycosyltransferase. (306 aa)    
Predicted Functional Partners:
tuaH
Putative teichuronic acid biosynthesis glycosyltransferase TuaH.
  
 0.908
rmlD_2
dTDP-4-dehydrorhamnose reductase.
 
 
 0.866
rmlD_1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.808
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 0.797
rfbX
Putative O-antigen transporter.
  
  
 0.772
AQR95101.1
Hypothetical protein.
  
  
 0.771
AQR95100.1
Acyltransferase family protein.
     
 0.765
AQR95102.1
Hypothetical protein.
 
     0.742
ptk
Tyrosine-protein kinase ptk.
     
 0.720
AQR95097.1
Hypothetical protein.
       0.702
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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