STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95100.1Acyltransferase family protein. (360 aa)    
Predicted Functional Partners:
AQR95101.1
Hypothetical protein.
  
  
 0.799
AQR95099.1
N-glycosyltransferase.
     
 0.765
AQR95102.1
Hypothetical protein.
       0.721
rfbX
Putative O-antigen transporter.
  
  
 0.700
tuaH
Putative teichuronic acid biosynthesis glycosyltransferase TuaH.
  
  
 0.696
ptk
Tyrosine-protein kinase ptk.
  
  
 0.691
AQR95097.1
Hypothetical protein.
       0.656
cph2_2
Phytochrome-like protein cph2.
 
  
 0.535
cph2_1
Phytochrome-like protein cph2.
 
    0.509
AQR95094.1
GDSL-like lipase/acylhydrolase.
     
 0.476
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.