Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQR95102.1Hypothetical protein. (355 aa)    
Predicted Functional Partners:
AQR95101.1
Hypothetical protein.
  
  
 0.744
AQR95099.1
N-glycosyltransferase.
 
     0.743
mnmE
tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.721
AQR95100.1
Acyltransferase family protein.
       0.720
tuaH
Putative teichuronic acid biosynthesis glycosyltransferase TuaH.
  
  
 0.665
rfbX
Putative O-antigen transporter.
  
    0.631
AQR95097.1
Hypothetical protein.
       0.599
ptk
Tyrosine-protein kinase ptk.
       0.590
ywaC_1
GTP pyrophosphokinase YwaC.
   
    0.512
ywaC_2
GTP pyrophosphokinase YwaC.
   
    0.512
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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