Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQR95113.1Lineage-specific thermal regulator protein. (105 aa)    
Predicted Functional Partners:
AQR95112.1
Hypothetical protein.
       0.825
tdcB
L-threonine dehydratase catabolic TdcB.
       0.510
AQR95114.1
Hypothetical protein.
     
 0.464
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
    0.462
cycB
Cyclodextrin-binding protein precursor.
   
    0.446
ycjU
Beta-phosphoglucomutase.
   
    0.444
AQR97575.1
Phosphorylated carbohydrates phosphatase.
   
    0.444
AQR95906.1
Hypothetical protein.
 
     0.431
cdaR_2
Carbohydrate diacid regulator.
  
    0.404
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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