STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95236.1Hypothetical protein. (400 aa)    
Predicted Functional Partners:
spoVD_2
Stage V sporulation protein D.
  
 0.862
spoVD_3
Stage V sporulation protein D.
  
 0.862
AQR97659.1
Hypothetical protein.
   
 0.794
divIVA
Septum site-determining protein DivIVA.
   
 
 0.728
pbp
Beta-lactam-inducible penicillin-binding protein.
   
 0.701
pbpA
Penicillin-binding protein A.
   
 0.701
penA
Penicillin-binding protein 2B.
   
 0.700
spoVD_1
Stage V sporulation protein D.
   
 0.692
ykuD
Putative L,D-transpeptidase YkuD.
     
 0.663
ponA
Penicillin-binding protein 1A/1B.
   
 0.661
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.