STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshABGlutathione biosynthesis bifunctional protein GshAB; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily. (770 aa)    
Predicted Functional Partners:
pepD
Cytosol non-specific dipeptidase.
  
 
 0.954
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
    
  0.933
cphB
Cyanophycinase; Belongs to the peptidase S51 family.
 
  
 0.917
ilvK
Branched-chain-amino-acid aminotransferase 2.
   
 
 0.912
dat_2
D-alanine aminotransferase.
   
 
 0.912
cphA
Cyanophycin synthetase; Belongs to the MurCDEF family.
 
 
0.898
glnA_2
Glutamine synthetase.
  
 
 0.898
metC_2
Cystathionine beta-lyase.
    
 0.873
cysK_1
Cysteine synthase.
    
 0.846
mccA_2
O-acetylserine dependent cystathionine beta-synthase.
    
 0.846
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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