STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blaR1_4Regulatory protein BlaR1. (86 aa)    
Predicted Functional Partners:
blaR1_3
Regulatory protein BlaR1.
 
     0.945
AQR95326.1
Hypothetical protein.
       0.613
AQR95329.1
RmlD substrate binding domain protein.
       0.598
AQR95330.1
Hypothetical protein.
       0.529
AQR95325.1
Hypothetical protein.
       0.437
AQR97126.1
Hypothetical protein.
  
     0.432
AQR95777.1
Subtilase family protein.
  
     0.417
AQR93712.1
Subtilase family protein.
  
     0.406
AQR96273.1
Putative peptidoglycan binding domain protein.
  
     0.406
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.