STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eryAErythronolide synthase, modules 3 and 4. (3070 aa)    
Predicted Functional Partners:
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
 
0.962
AQR96122.1
Hypothetical protein.
 
 0.947
grsB
Gramicidin S synthase 2.
 
 
0.930
AQR94628.1
long-chain-fatty-acid--AMP ligase FadD32.
 
0.886
mbtB
Phenyloxazoline synthase MbtB.
 
0.865
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 0.854
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.854
lgrE_3
Linear gramicidin dehydrogenase LgrE.
 
 
 0.851
lgrE_1
Linear gramicidin dehydrogenase LgrE.
 
 
 0.834
lgrE_2
Linear gramicidin dehydrogenase LgrE.
 
 
 0.833
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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