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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95387.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
AQR93110.1
Hypothetical protein.
  
     0.756
AQR98175.1
Hypothetical protein.
  
     0.695
AQR96550.1
Hypothetical protein.
  
     0.689
AQR97588.1
Hypothetical protein.
  
     0.613
AQR95386.1
Hemerythrin HHE cation binding domain protein.
 
     0.602
AQR95388.1
Bacterioferritin-associated ferredoxin.
       0.590
AQR95385.1
Hypothetical protein.
 
     0.577
AQR96551.1
Hypothetical protein.
  
     0.561
cooS2
Carbon monoxide dehydrogenase 2.
  
     0.547
cfg
Putative AgrB-like protein.
  
     0.529
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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