Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
padHNADH-dependent phenylglyoxylate dehydrogenase subunit epsilon. (415 aa)    
Predicted Functional Partners:
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.994
dmsB_2
Anaerobic dimethyl sulfoxide reductase chain B.
 
 
 
 0.952
gltB_2
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.947
nasD
Nitrite reductase.
 
     0.923
sfrB_4
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.858
queE_1
7-carboxy-7-deazaguanine synthase.
  
  
 0.798
asrA
Anaerobic sulfite reductase subunit A.
 
  
  0.765
glnA_2
Glutamine synthetase.
    
 0.746
asrC_1
Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
   
 0.733
cooS1
Carbon monoxide dehydrogenase 1.
 
  
 0.728
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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