Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glnQ_4Glutamine transport ATP-binding protein GlnQ. (509 aa)    
Predicted Functional Partners:
AQR95494.1
Hypothetical protein.
 
   
 0.952
AQR95496.1
Hypothetical protein.
 
   
 0.948
btuF
Vitamin B12-binding protein.
 
     0.890
ubiE_3
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE.
 
   
 0.826
AQR95491.1
Putative ABC transporter ATP-binding protein.
 
   
 0.821
hypA_1
Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
 0.737
hypA_2
Hydrogenase/urease nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
 0.737
AQR95490.1
Putative ABC transporter permease protein.
 
     0.736
hypD
Hydrogenase isoenzymes formation protein HypD.
  
  
 0.684
hybG
Hydrogenase-2 operon protein HybG.
  
  
 0.682
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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