STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95494.1Hypothetical protein. (343 aa)    
Predicted Functional Partners:
glnQ_4
Glutamine transport ATP-binding protein GlnQ.
 
     0.955
btuF
Vitamin B12-binding protein.
 
  
 0.892
AQR95496.1
Hypothetical protein.
 
    
0.807
ubiE_3
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE.
 
  
  0.805
AQR95491.1
Putative ABC transporter ATP-binding protein.
 
  
 0.800
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.774
AQR95490.1
Putative ABC transporter permease protein.
 
  
 0.732
mopII
Molybdenum-pterin-binding protein 2.
 
 
  0.662
fbpC2
Fe(3+) ions import ATP-binding protein FbpC 2.
    
  0.620
AQR96721.1
Major facilitator superfamily protein.
  
  
 0.558
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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