Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR95550.1Hypothetical protein. (531 aa)    
Predicted Functional Partners:
AQR95549.1
Phage portal protein, SPP1 Gp6-like.
       0.825
AQR95551.1
Hypothetical protein.
       0.773
AQR95547.1
Terminase small subunit.
     
 0.718
AQR98121.1
Phage capsid family protein.
  
 
 0.612
draG
ADP-ribosyl-[dinitrogen reductase] glycohydrolase.
   
   0.610
AQR95548.1
Phage terminase large subunit.
     
 0.606
AQR98119.1
Phage head-tail joining protein.
  
 
 0.594
AQR98125.1
Phage terminase, small subunit.
  
  
 0.567
tepA
Translocation-enhancing protein TepA.
  
  
 0.514
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
  
 0.514
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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