STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bin3Putative DNA-invertase bin3. (219 aa)    
Predicted Functional Partners:
pinR_2
Putative DNA-invertase from lambdoid prophage Rac.
  
     0.768
AQR95554.1
Hypothetical protein.
       0.678
AQR95547.1
Terminase small subunit.
 
    0.662
AQR95555.1
Hypothetical protein.
       0.512
AQR95556.1
Hypothetical protein.
       0.512
hin_2
DNA-invertase hin.
  
     0.454
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
   
 0.432
AQR95566.1
Phage tail sheath protein.
  
    0.426
dsbD
Thiol:disulfide interchange protein DsbD precursor.
   
    0.420
hin_1
DNA-invertase hin.
  
     0.410
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.