STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95581.1Bacterial Ig-like domain protein. (411 aa)    
Predicted Functional Partners:
AQR95547.1
Terminase small subunit.
  
  
 0.604
AQR95548.1
Phage terminase large subunit.
  
  
 0.526
AQR97590.1
Amylo-alpha-1,6-glucosidase.
  
  
  0.509
AQR95582.1
Hemolysin XhlA.
       0.458
AQR93672.1
Thermophilic serine proteinase precursor.
  
 
 0.454
AQR95583.1
Hypothetical protein.
       0.430
AQR94676.1
Hypothetical protein.
  
     0.423
AQR94675.1
Hypothetical protein.
  
     0.422
malQ_1
4-alpha-glucanotransferase.
    
 0.410
malQ_2
4-alpha-glucanotransferase.
    
 0.410
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.