STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95632.1Leucine carboxyl methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (309 aa)    
Predicted Functional Partners:
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
     
 0.661
AQR96785.1
Hypothetical protein.
  
     0.557
grsB
Gramicidin S synthase 2.
 
   
 0.528
AQR96413.1
Hypothetical protein.
  
     0.507
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
 
   
 0.480
yoaJ
expansin-YoaJ precursor.
  
     0.475
mbtB
Phenyloxazoline synthase MbtB.
 
  
 0.465
mprA_3
Transcriptional repressor MprA.
  
     0.457
catD
3-oxoadipate enol-lactonase 2.
     
 0.425
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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