STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95641.1Multicopper oxidase. (486 aa)    
Predicted Functional Partners:
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
     
 0.827
copA_3
Copper-exporting P-type ATPase A.
  
 0.797
mbtB
Phenyloxazoline synthase MbtB.
     
 0.761
copA_2
Copper-exporting P-type ATPase A.
 
 
 0.760
AQR94628.1
long-chain-fatty-acid--AMP ligase FadD32.
     
 0.677
AQR95815.1
Putative two-component membrane permease complex subunit.
  
  
 0.677
AQR95664.1
Hypothetical protein.
  
     0.673
AQR93790.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.670
grsB
Gramicidin S synthase 2.
    
 0.670
AQR93283.1
Hypothetical protein.
  
     0.667
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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