STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95701.1Putative Mg(2+) transport ATPase. (209 aa)    
Predicted Functional Partners:
AQR95991.1
Hypothetical protein.
  
  
 0.783
AQR93065.1
Calcium-transporting ATPase.
  
 
 0.611
yoaB
Calcium-transporting ATPase 1.
  
 
 0.611
AQR93632.1
Calcium-transporting ATPase 1.
  
 
 0.611
yloB
Calcium-transporting ATPase.
  
 
 0.611
AQR98155.1
Calcium-transporting ATPase 1.
  
 
 0.611
flhB_1
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
   
   0.563
cinA_3
Putative competence-damage inducible protein; Belongs to the CinA family.
  
  
 0.512
clcA
H(+)/Cl(-) exchange transporter ClcA.
  
  
 0.497
AQR95699.1
Hypothetical protein.
       0.491
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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