Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQR93057.1 | AQR93217.1 | CLSAP_03320 | CLSAP_05070 | Putative RNA polymerase sigma factor SigI. | Glutathionylspermidine synthase. | 0.587 |
| AQR93057.1 | flgD | CLSAP_03320 | CLSAP_42780 | Putative RNA polymerase sigma factor SigI. | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.738 |
| AQR93057.1 | fliD | CLSAP_03320 | CLSAP_43440 | Putative RNA polymerase sigma factor SigI. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.501 |
| AQR93057.1 | fliS | CLSAP_03320 | CLSAP_43450 | Putative RNA polymerase sigma factor SigI. | Flagellar protein FliS. | 0.578 |
| AQR93057.1 | fliU_3 | CLSAP_03320 | CLSAP_30370 | Putative RNA polymerase sigma factor SigI. | Flagellar biosynthetic protein FliU. | 0.448 |
| AQR93217.1 | AQR93057.1 | CLSAP_05070 | CLSAP_03320 | Glutathionylspermidine synthase. | Putative RNA polymerase sigma factor SigI. | 0.587 |
| AQR93217.1 | fliU_3 | CLSAP_05070 | CLSAP_30370 | Glutathionylspermidine synthase. | Flagellar biosynthetic protein FliU. | 0.460 |
| AQR94901.1 | flgD | CLSAP_22150 | CLSAP_42780 | RNA polymerase factor sigma-70. | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.694 |
| AQR94901.1 | fliD | CLSAP_22150 | CLSAP_43440 | RNA polymerase factor sigma-70. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.501 |
| AQR94901.1 | fliS | CLSAP_22150 | CLSAP_43450 | RNA polymerase factor sigma-70. | Flagellar protein FliS. | 0.578 |
| AQR94901.1 | fliU_3 | CLSAP_22150 | CLSAP_30370 | RNA polymerase factor sigma-70. | Flagellar biosynthetic protein FliU. | 0.448 |
| AQR95723.1 | aat | CLSAP_30390 | CLSAP_30380 | Methyltransferase domain protein. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.745 |
| AQR95723.1 | fliU_3 | CLSAP_30390 | CLSAP_30370 | Methyltransferase domain protein. | Flagellar biosynthetic protein FliU. | 0.634 |
| AQR95723.1 | mutS_2 | CLSAP_30390 | CLSAP_30360 | Methyltransferase domain protein. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.402 |
| aat | AQR95723.1 | CLSAP_30380 | CLSAP_30390 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Methyltransferase domain protein. | 0.745 |
| aat | fliU_3 | CLSAP_30380 | CLSAP_30370 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Flagellar biosynthetic protein FliU. | 0.651 |
| aat | mutS_2 | CLSAP_30380 | CLSAP_30360 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.434 |
| flgD | AQR93057.1 | CLSAP_42780 | CLSAP_03320 | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Putative RNA polymerase sigma factor SigI. | 0.738 |
| flgD | AQR94901.1 | CLSAP_42780 | CLSAP_22150 | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | RNA polymerase factor sigma-70. | 0.694 |
| flgD | fliD | CLSAP_42780 | CLSAP_43440 | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.866 |
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