STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95741.1Hypothetical protein. (613 aa)    
Predicted Functional Partners:
AQR93489.1
Hypothetical protein.
  
 
 0.720
AQR93488.1
Phage tail protein.
  
   0.704
AQR98121.1
Phage capsid family protein.
  
 
 0.624
AQR98119.1
Phage head-tail joining protein.
  
 
 0.613
AQR95550.1
Hypothetical protein.
  
   0.577
AQR98123.1
Phage portal protein.
  
   0.577
AQR95569.1
Phage-related minor tail protein.
  
   0.554
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 0.506
AQR93487.1
Hypothetical protein.
  
  
 0.481
pel
Pectate trisaccharide-lyase precursor.
    
 0.459
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.