Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
epr_1Minor extracellular protease Epr precursor. (608 aa)    
Predicted Functional Partners:
AQR95777.1
Subtilase family protein.
 
    
0.840
AQR96273.1
Putative peptidoglycan binding domain protein.
 
  
 0.811
ssbB
Single-stranded DNA-binding protein B.
  
   
 0.692
AQR95836.1
Small, acid-soluble spore protein, alpha/beta type.
  
     0.567
AQR93304.1
LysM domain protein.
 
  
 0.562
AQR92810.1
Hypothetical protein.
 
 
 0.555
sspC2_1
Small, acid-soluble spore protein C2.
  
     0.547
AQR95035.1
Hypothetical protein.
  
     0.512
spoIIIAF
Hypothetical protein.
  
     0.486
spoIIIAA
Hypothetical protein.
  
     0.480
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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