STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacCTagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (301 aa)    
Predicted Functional Partners:
fruA_2
PTS system fructose-specific EIIABC component.
 
 
 0.999
fruA_3
PTS system fructose-specific EIIBC component.
 
 
 0.995
manP
PTS system mannose-specific EIIBCA component.
 
 
 0.995
fba_1
Fructose-bisphosphate aldolase.
 
 
 0.994
fba_2
Fructose-bisphosphate aldolase.
 
 
 0.990
lacR_2
Lactose phosphotransferase system repressor.
 
  
 0.989
gatY
D-tagatose-1,6-bisphosphate aldolase subunit GatY.
 
 
 0.987
ywlF
Putative sugar phosphate isomerase YwlF.
  
 
 0.957
fbp
Fructose-1,6-bisphosphatase class 3.
 
  
 0.952
mtlF
Mannitol-specific phosphotransferase enzyme IIA component.
 
  
 0.940
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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