STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95812.1Putative multidrug export ATP-binding/permease protein. (577 aa)    
Predicted Functional Partners:
AQR95813.1
Putative ABC transporter ATP-binding protein.
 
   
0.879
lagD
lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
 
0.655
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.613
hscC_1
Chaperone protein HscC; Belongs to the heat shock protein 70 family.
  
 0.592
grsB
Gramicidin S synthase 2.
  
  
 0.559
hscC_2
Chaperone protein HscC; Belongs to the heat shock protein 70 family.
  
 0.539
AQR96122.1
Hypothetical protein.
  
 
 0.525
dnaJ_2
Chaperone protein DnaJ.
  
 
 0.504
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
 0.493
cydD
ATP-binding/permease protein CydD.
 
 
 
0.457
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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