sigE_3 protein (Clostridium saccharoperbutylacetonicum)

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Score

sigE_3

ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. (257 aa)

Predicted Functional Partners:

sigV_1

0.731

sigW_2

0.708

sigV_3

0.705

sigV_2

0.653

sigW_1

0.653

rpoC

0.563

rpoB

0.559

AQR95845.1

0.554

rpoA

0.542

rpoZ

0.542

Your Current Organism:

Clostridium saccharoperbutylacetonicum

NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR95845.1	sigE_3	CLSAP_31610	CLSAP_31620	Glyoxalase-like domain protein.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.554
rpoA	rpoB	CLSAP_02140	CLSAP_01780	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	CLSAP_02140	CLSAP_01790	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	CLSAP_02140	CLSAP_12470	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoA	sigE_3	CLSAP_02140	CLSAP_31620	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.542
rpoA	sigV_1	CLSAP_02140	CLSAP_03470	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.542
rpoA	sigV_2	CLSAP_02140	CLSAP_21070	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.542
rpoA	sigV_3	CLSAP_02140	CLSAP_26200	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.542
rpoA	sigW_1	CLSAP_02140	CLSAP_25820	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily.	0.542
rpoA	sigW_2	CLSAP_02140	CLSAP_46430	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily.	0.542
rpoB	rpoA	CLSAP_01780	CLSAP_02140	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	CLSAP_01780	CLSAP_01790	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	CLSAP_01780	CLSAP_12470	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.996
rpoB	sigE_3	CLSAP_01780	CLSAP_31620	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.559
rpoB	sigV_1	CLSAP_01780	CLSAP_03470	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.559
rpoB	sigV_2	CLSAP_01780	CLSAP_21070	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.559
rpoB	sigV_3	CLSAP_01780	CLSAP_26200	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.559
rpoB	sigW_1	CLSAP_01780	CLSAP_25820	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily.	0.559
rpoB	sigW_2	CLSAP_01780	CLSAP_46430	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily.	0.559
rpoC	rpoA	CLSAP_01790	CLSAP_02140	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999

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