STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR95898.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
gmr_3
Cyclic di-GMP phosphodiesterase Gmr.
  
    0.585
AQR95897.1
Xylose isomerase-like TIM barrel.
       0.572
AQR95896.1
HD domain protein.
       0.553
lytA_9
Autolysin.
  
     0.549
AQR96590.1
Hypothetical protein.
  
     0.494
rhaS_2
HTH-type transcriptional activator RhaS.
  
     0.488
lytA_15
Autolysin.
  
     0.459
AQR95895.1
Hypothetical protein.
       0.417
lytA_7
Autolysin.
  
     0.414
racX_1
Putative amino-acid racemase; Belongs to the aspartate/glutamate racemases family.
       0.412
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.