STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aadKAminoglycoside 6-adenylyltransferase. (202 aa)    
Predicted Functional Partners:
AQR94744.1
Putative cell wall binding repeat protein.
  
     0.662
tlp
Small, acid-soluble spore protein Tlp; Belongs to the Tlp family.
  
     0.628
AQR96551.1
Hypothetical protein.
  
     0.596
AQR95874.1
Hypothetical protein.
  
     0.581
AQR98216.1
Ski2-like helicase.
  
     0.575
AQR95938.1
Hypothetical protein.
 
     0.543
AQR94951.1
Hypothetical protein.
  
     0.542
AQR95940.1
Hypothetical protein.
       0.515
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
      
 0.500
AQR94684.1
SMI1 / KNR4 family protein.
  
     0.481
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.