Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR95971.1Cytochrome D1 heme domain protein. (293 aa)    
Predicted Functional Partners:
grsB
Gramicidin S synthase 2.
  
    0.873
dhbF
Dimodular nonribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
    0.770
AQR92810.1
Hypothetical protein.
 
 
 
 0.739
AQR96122.1
Hypothetical protein.
  
 
 0.710
AQR94009.1
PRC-barrel domain protein.
  
     0.704
mbtB
Phenyloxazoline synthase MbtB.
  
    0.626
lgrD
Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
  
    0.623
murAB
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.612
mreD
Rod shape-determining protein MreD.
  
     0.583
fruA_1
Fructan beta-fructosidase precursor.
  
    0.573
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.