Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
nasDNitrite reductase. (217 aa)    
Predicted Functional Partners:
fprA1_1
Flavo-diiron protein FprA1.
  
 0.953
gltB_2
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.947
padH
NADH-dependent phenylglyoxylate dehydrogenase subunit epsilon.
 
     0.923
cdr_1
Coenzyme A disulfide reductase.
    
 0.909
nasF
uroporphyrinogen-III C-methyltransferase.
  
 0.756
mmgC
acyl-CoA dehydrogenase.
  
 
 0.701
AQR94955.1
Iron hydrogenase 1.
  
 
 0.700
rbr_2
Rubrerythrin.
  
 
 0.687
hcr
NADH oxidoreductase hcr.
 
  
 0.679
rub
Rubredoxin.
  
 
 0.676
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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