Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
pdaA_2peptidoglycan-N-acetylmuramic acid deacetylase PdaA precursor. (332 aa)    
Predicted Functional Partners:
arnT
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase.
  
 
 0.519
AQR96062.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
 0.519
AQR96339.1
Hypothetical protein.
  
 
 0.519
xynB_9
Beta-xylosidase.
     
 0.451
AQR94875.1
Metallo-beta-lactamase superfamily protein.
   
    0.446
rbn_1
Ribonuclease BN.
   
    0.443
AQR96122.1
Hypothetical protein.
  
  
 0.426
AQR93672.1
Thermophilic serine proteinase precursor.
 
   
 0.423
amiC
N-acetylmuramoyl-L-alanine amidase AmiC precursor.
  
   
 0.419
ylbJ
Sporulation integral membrane protein YlbJ.
  
  
 0.414
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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