STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96062.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (510 aa)    
Predicted Functional Partners:
bepA
Beta-barrel assembly-enhancing protease.
 
  
 0.788
AQR92810.1
Hypothetical protein.
  
  
 0.783
AQR93772.1
Hypothetical protein.
 
  
 0.767
AQR94225.1
Hypothetical protein.
  
     0.755
dnaQ
DNA polymerase III subunit epsilon.
  
     0.726
AQR93797.1
Hypothetical protein.
  
     0.723
AQR97667.1
Sporulation inhibitor KapD.
  
     0.709
AQR94889.1
Hypothetical protein.
  
     0.705
AQR97523.1
Tetratricopeptide repeat protein.
  
     0.699
AQR92871.1
Hypothetical protein.
  
    0.696
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.