STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96098.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
copA_2
Copper-exporting P-type ATPase A.
  
 0.889
copZ
Copper chaperone CopZ.
  
 0.863
AQR95041.1
Hypothetical protein.
  
 0.805
copA_3
Copper-exporting P-type ATPase A.
  
 0.803
AQR92878.1
Heavy-metal-associated domain protein.
  
 0.798
cadC
Hypothetical protein; Transcriptional repressor SmtB homolog.
  
  
 0.578
arsR2
Hypothetical protein; Transcriptional repressor SmtB homolog.
  
  
 0.578
AQR95641.1
Multicopper oxidase.
  
 
 0.564
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.505
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.479
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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