Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
inlA_2internalin-A precursor. (350 aa)    
Predicted Functional Partners:
AQR96122.1
Hypothetical protein.
  
  
 0.744
AQR96123.1
Pentapeptide repeat protein.
     
 0.643
AQR96124.1
Hypothetical protein.
       0.628
AQR96125.1
Hypothetical protein.
       0.628
AQR96126.1
Hypothetical protein.
       0.628
AQR96127.1
Hypothetical protein.
       0.592
AQR96120.1
Hypothetical protein.
  
    0.474
AQR93672.1
Thermophilic serine proteinase precursor.
  
 
 0.464
AQR96390.1
Ankyrin repeat protein.
 
   
 0.445
copA_2
Copper-exporting P-type ATPase A.
   
    0.443
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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