STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR96252.1Hypothetical protein; BAAT / Acyl-CoA thioester hydrolase C terminal. (426 aa)    
Predicted Functional Partners:
slyA_8
Transcriptional regulator SlyA.
 
     0.780
AQR95874.1
Hypothetical protein.
  
     0.596
AQR93592.1
Fibronectin type III domain protein.
  
     0.580
hemN_4
Oxygen-independent coproporphyrinogen-III oxidase.
  
     0.580
AQR96122.1
Hypothetical protein.
 
     0.574
AQR94322.1
Isoform II.
  
     0.544
pepIP
Proline iminopeptidase.
 
   
 0.521
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
  
 0.515
AQR98216.1
Ski2-like helicase.
  
     0.452
AQR94408.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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