STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloB_3Hydroxyacylglutathione hydrolase. (309 aa)    
Predicted Functional Partners:
prs_2
Ribose-phosphate pyrophosphokinase.
  
  
 0.510
comC
Type 4 prepilin-like proteins leader peptide-processing enzyme.
 
  
 0.507
pilM
Competence protein A.
  
   
 0.483
comEA
ComE operon protein 1.
 
  
 0.443
epsF_3
Type II secretion system protein F.
  
  
 0.442
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.439
AQR96039.1
Cysteine-rich secretory protein family protein.
 
     0.418
epsF_2
Type II secretion system protein F.
  
  
 0.416
cinA_3
Putative competence-damage inducible protein; Belongs to the CinA family.
      
 0.414
AQR93672.1
Thermophilic serine proteinase precursor.
 
  
 0.408
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.