Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sodA_1Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (201 aa)    
Predicted Functional Partners:
sodA_2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 
0.904
cdr_2
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 
 0.845
rplQ
50S ribosomal protein L17.
   
 0.811
cdr_1
Coenzyme A disulfide reductase.
  
 
 0.805
cotJC
Hypothetical protein.
   
 
 0.783
ydbD
Putative manganese catalase.
   
 
 0.783
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 
 0.751
AQR95659.1
Manganese containing catalase.
   
 
 0.729
gpx1_1
Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.
   
 0.728
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
   
 
 0.726
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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