STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96350.1YibE/F-like protein. (253 aa)    
Predicted Functional Partners:
AQR96351.1
YibE/F-like protein.
 
   
0.866
fgs
Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
   
    0.446
AQR93272.1
YibE/F-like protein.
 
   
0.444
AQR96352.1
Putative multidrug export ATP-binding/permease protein.
       0.434
AQR96353.1
Hypothetical protein.
       0.434
irtA
Iron import ATP-binding/permease protein IrtA.
       0.434
AQR97237.1
YibE/F-like protein.
 
   
0.407
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.