STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96378.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
bsdC_3
Phenolic acid decarboxylase subunit C; Belongs to the UbiD family.
    
 0.941
bsdC_1
Phenolic acid decarboxylase subunit C; Catalyzes the reversible decarboxylation of aromatic carboxylic acids.
    
 0.761
celE
Endoglucanase E precursor.
  
     0.556
AQR96389.1
Tetratricopeptide repeat protein.
 
     0.526
AQR94466.1
2-dehydropantoate 2-reductase.
 
     0.512
AQR95897.1
Xylose isomerase-like TIM barrel.
  
     0.482
pad1_1
Putative aromatic acid decarboxylase.
    
 0.467
pad1_2
Putative aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.467
AQR96313.1
Acetyltransferase (GNAT) family protein.
  
     0.461
AQR96377.1
Tetratricopeptide repeat protein.
       0.444
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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