STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fruA_3PTS system fructose-specific EIIBC component. (358 aa)    
Predicted Functional Partners:
manP
PTS system mannose-specific EIIBCA component.
  
 0.998
lacC
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 
 0.996
fruA_2
PTS system fructose-specific EIIABC component.
 
 
0.983
ptsH
Phosphocarrier protein HPr.
  
 
 0.975
gatY
D-tagatose-1,6-bisphosphate aldolase subunit GatY.
  
 
 0.973
mtlF
Mannitol-specific phosphotransferase enzyme IIA component.
 
 
 0.948
fba_2
Fructose-bisphosphate aldolase.
  
 
 0.947
licR_3
Putative licABCH operon regulator.
 
 
 0.930
manR
Transcriptional regulator ManR.
 
 
 0.921
fba_1
Fructose-bisphosphate aldolase.
  
 
 0.919
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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