STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96494.1Type I restriction enzyme EcoKI subunit R. (1102 aa)    
Predicted Functional Partners:
AQR96493.1
Putative type I restriction enzymeP M protein.
 
 
 0.984
hsdS
Type-1 restriction enzyme EcoKI specificity protein.
 
 
 0.970
bcgIA
Restriction enzyme BgcI subunit alpha.
 
 
 0.929
AQR96495.1
Hypothetical protein.
 
     0.782
AQR96496.1
Hypothetical protein.
 
     0.750
AQR98202.1
Restriction endonuclease.
  
  
 0.527
AQR96118.1
Hypothetical protein.
  
  
 0.524
AQR95151.1
Fibronectin-binding protein A N-terminus (FbpA).
  
  
 0.498
AQR96421.1
Hypothetical protein.
  
    0.474
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.