STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96520.1Periplasmic [NiFeSe] hydrogenase large subunit. (472 aa)    
Predicted Functional Partners:
AQR96521.1
Periplasmic [NiFeSe] hydrogenase small subunit precursor.
 
 0.993
AQR94371.1
Periplasmic [NiFeSe] hydrogenase small subunit precursor.
 
 0.987
hyaD
Hydrogenase 1 maturation protease.
 
 0.984
hypA_2
Hydrogenase/urease nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.981
dmsB_2
Anaerobic dimethyl sulfoxide reductase chain B.
  
 
 0.969
hypB_2
Hydrogenase isoenzymes nickel incorporation protein HypB.
 
  
 0.947
hypD
Hydrogenase isoenzymes formation protein HypD.
 
 
 0.940
hybG
Hydrogenase-2 operon protein HybG.
 
 
 0.932
cooS2
Carbon monoxide dehydrogenase 2.
     
 0.913
cooS1
Carbon monoxide dehydrogenase 1.
     
 0.913
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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