STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcA_2Glycolate permease GlcA; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (511 aa)    
Predicted Functional Partners:
AQR96571.1
Putative FAD-linked oxidoreductase.
 
  
 0.814
lldD_1
L-lactate dehydrogenase.
 
  
 0.737
lldD_2
L-lactate dehydrogenase.
 
  
 0.730
AQR97879.1
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase.
  
  
 0.680
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.630
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.630
AQR93548.1
Hypothetical protein.
 
   
 0.587
glcD1
Putative FAD-linked oxidoreductase.
 
  
 0.583
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
  
 0.581
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
  
 0.560
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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