Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR96580.13-demethylubiquinone-9 3-methyltransferase. (294 aa)    
Predicted Functional Partners:
AQR96581.1
Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein.
 
    0.903
ycgJ_1
Putative methyltransferase YcgJ.
   
    0.777
fra
Intracellular iron chaperone frataxin.
 
     0.629
AQR96087.1
Hypothetical protein; Belongs to the UPF0311 family.
     
  0.586
folA_2
Dihydrofolate reductase.
 
     0.525
AQR95418.1
Rifampin ADP-ribosyl transferase.
 
     0.460
AQR96582.1
Hypothetical protein.
       0.424
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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